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Fig. 1 | One Health Outlook

Fig. 1

From: Typing methods based on whole genome sequencing data

Fig. 1

Wheel of tools and supported methods. Provided methods: Antimicrobial resistance gene detection (AMR), Virulence factor search (Virulence), Serotyping and Phylogeny (highlighted in black/grey) by selected tools (BIGSdb, Bionumerics, CGE, COMPARE, PATRIC, EnteroBase, INNUENDO, IRIDA, NCBI Pathogens, PathogenWatch and SeqSphere). Organisms for which a methodology is supported by a tool are specified. For phylogeny, the underlying methods are mentioned. White fields indicate that functionality is not supported by the respective platform. ML = Maximum Likelihood

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One Health Outlook

ISSN: 2524-4655